Evolution by gene loss

R Albalat, C Cañestro - Nature Reviews Genetics, 2016 - nature.com
The recent increase in genomic data is revealing an unexpected perspective of gene loss as
a pervasive source of genetic variation that can cause adaptive phenotypic diversity. This …

Tribolium castaneum: A Model Insect for Fundamental and Applied Research

JF Campbell, CG Athanassiou… - Annual Review of …, 2022 - annualreviews.org
Tribolium castaneum has a long history as a model species in many distinct subject areas,
but improved connections among the genetics, genomics, behavioral, ecological, and pest …

Deeply conserved synteny and the evolution of metazoan chromosomes

O Simakov, J Bredeson, K Berkoff, F Marletaz… - Science …, 2022 - science.org
Animal genomes show networks of deeply conserved gene linkages whose phylogenetic
scope and chromosomal context remain unclear. Here, we report chromosome-scale …

[HTML][HTML] Evolutionary history of the Hymenoptera

RS Peters, L Krogmann, C Mayer, A Donath, S Gunkel… - Current Biology, 2017 - Elsevier
Summary Hymenoptera (sawflies, wasps, ants, and bees) are one of four mega-diverse
insect orders, comprising more than 153,000 described and possibly up to one million …

OrthoDB v9. 1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs

EM Zdobnov, F Tegenfeldt, D Kuznetsov… - Nucleic acids …, 2017 - academic.oup.com
OrthoDB is a comprehensive catalog of orthologs, genes inherited by extant species from a
single gene in their last common ancestor. In 2016 OrthoDB reached its 9th release, growing …

Phylogenomics resolves the timing and pattern of insect evolution

B Misof, S Liu, K Meusemann, RS Peters, A Donath… - Science, 2014 - science.org
Insects are the most speciose group of animals, but the phylogenetic relationships of many
major lineages remain unresolved. We inferred the phylogeny of insects from 1478 protein …

[HTML][HTML] Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges

A Gouin, A Bretaudeau, K Nam, S Gimenez, JM Aury… - Scientific reports, 2017 - nature.com
Emergence of polyphagous herbivorous insects entails significant adaptation to recognize,
detoxify and digest a variety of host-plants. Despite of its biological and practical importance …

The Ecoresponsive Genome of Daphnia pulex

JK Colbourne, ME Pfrender, D Gilbert, WK Thomas… - Science, 2011 - science.org
We describe the draft genome of the microcrustacean Daphnia pulex, which is only 200
megabases and contains at least 30,907 genes. The high gene count is a consequence of …

Phylogenomics and the evolution of hemipteroid insects

KP Johnson, CH Dietrich, F Friedrich… - Proceedings of the …, 2018 - National Acad Sciences
Hemipteroid insects (Paraneoptera), with over 10% of all known insect diversity, are a major
component of terrestrial and aquatic ecosystems. Previous phylogenetic analyses have not …

[HTML][HTML] The genome of Tetranychus urticae reveals herbivorous pest adaptations

M Grbić, T Van Leeuwen, RM Clark, S Rombauts… - Nature, 2011 - nature.com
The spider mite Tetranychus urticae is a cosmopolitan agricultural pest with an extensive
host plant range and an extreme record of pesticide resistance. Here we present the …