Parallel and intertwining threads of domestication in allopolyploid cotton

D Yuan, CE Grover, G Hu, M Pan, ER Miller… - Advanced …, 2021 - Wiley Online Library
The two cultivated allopolyploid cottons, Gossypium hirsutum and Gossypium barbadense,
represent a remarkable example of parallel independent domestication, both involving …

[HTML][HTML] Asymmetric evolution and domestication in allotetraploid cotton (Gossypium hirsutum L.)

L Fang, X Guan, T Zhang - The Crop Journal, 2017 - Elsevier
Polyploidy plays a major role in genome evolution, which corresponds to environmental
changes over millions of years. The mechanisms of genome evolution, particularly during …

[HTML][HTML] Genomic insights into divergence and dual domestication of cultivated allotetraploid cottons

L Fang, H Gong, Y Hu, C Liu, B Zhou, T Huang… - Genome Biology, 2017 - Springer
Background Cotton has been cultivated and used to make fabrics for at least 7000 years.
Two allotetraploid species of great commercial importance, Gossypium hirsutum and …

[HTML][HTML] Genomic diversifications of five Gossypium allopolyploid species and their impact on cotton improvement

ZJ Chen, A Sreedasyam, A Ando, Q Song… - Nature …, 2020 - nature.com
Polyploidy is an evolutionary innovation for many animals and all flowering plants, but its
impact on selection and domestication remains elusive. Here we analyze genome evolution …

[HTML][HTML] Duplicate gene evolution, homoeologous recombination, and transcriptome characterization in allopolyploid cotton

LE Flagel, JF Wendel, JA Udall - BMC genomics, 2012 - Springer
Background Modern allotetraploid cotton contains an “A” and “D” genome from an ancestral
polyploidy event that occurred approximately 1–2 million years ago. Diploid A-and D …

Evolutionary divergence of duplicated genomes in newly described allotetraploid cottons

R Peng, Y Xu, S Tian, T Unver, Z Liu… - Proceedings of the …, 2022 - National Acad Sciences
Allotetraploid cotton (Gossypium) species represents a model system for the study of plant
polyploidy, molecular evolution, and domestication. Here, chromosome-scale genome …

Evolution of the Cotton Genus, Gossypium, and Its Domestication in the Americas

CR Viot, JF Wendel - Critical Reviews in Plant Sciences, 2023 - Taylor & Francis
Gossypium, the cotton genus, includes∼ 50 species distributed in tropical and sub-tropical
regions of all continents except Europe. Here we provide a synopsis of the evolutionary …

Molecular confirmation of species status for the allopolyploid cotton species, Gossypium ekmanianum Wittmack

CE Grover, X Zhu, KK Grupp, JJ Jareczek… - Genetic Resources and …, 2015 - Springer
Understanding the relationship between domesticated crop species and their wild relatives
is paramount to germplasm maintenance and the utilization of wild relatives in breeding …

[PDF][PDF] Structural variation (SV)-based pan-genome and GWAS reveal the impacts of SVs on the speciation and diversification of allotetraploid cottons

S Jin, Z Han, Y Hu, Z Si, F Dai, L He, Y Cheng, Y Li… - Molecular Plant, 2023 - cell.com
Structural variations (SVs) have long been described as being involved in the origin,
adaption, and domestication of species. However, the underlying genetic and genomic …

[HTML][HTML] Unraveling cis and trans regulatory evolution during cotton domestication

Y Bao, G Hu, CE Grover, J Conover, D Yuan… - Nature …, 2019 - nature.com
Cis and trans regulatory divergence underlies phenotypic and evolutionary diversification.
Relatively little is understood about the complexity of regulatory evolution accompanying …