[HTML][HTML] Chloroplast genomes in Populus (Salicaceae): comparisons from an intensively sampled genus reveal dynamic patterns of evolution

J Zhou, S Zhang, J Wang, H Shen, B Ai, W Gao… - Scientific Reports, 2021 - nature.com
The chloroplast is one of two organelles containing a separate genome that codes for
essential and distinct cellular functions such as photosynthesis. Given the importance of …

[HTML][HTML] Phylogenomic analysis and dynamic evolution of chloroplast genomes in Salicaceae

Y Huang, J Wang, Y Yang, C Fan, J Chen - Frontiers in plant science, 2017 - frontiersin.org
Chloroplast genomes of plants are highly conserved in both gene order and gene content.
Analysis of the whole chloroplast genome is known to provide much more informative DNA …

[HTML][HTML] Dynamic evolution and phylogenomic analysis of the chloroplast genome in Schisandraceae

B Li, Y Zheng - Scientific Reports, 2018 - nature.com
Chloroplast genomes of plants are highly conserved in both gene order and gene content,
are maternally inherited, and have a lower rate of evolution. Chloroplast genomes are …

[HTML][HTML] Complete Chloroplast Genome of Sedum sarmentosum and Chloroplast Genome Evolution in Saxifragales

W Dong, C Xu, T Cheng, S Zhou - PloS one, 2013 - journals.plos.org
Comparative chloroplast genome analyses are mostly carried out at lower taxonomic levels,
such as the family and genus levels. At higher taxonomic levels, chloroplast genomes are …

[HTML][HTML] Comparative analysis of the complete chloroplast genome of Papaveraceae to identify rearrangements within the Corydalis chloroplast genome

SC Kim, YH Ha, BK Park, JE Jang, ES Kang, YS Kim… - Plos one, 2023 - journals.plos.org
Chloroplast genomes are valuable for inferring evolutionary relationships. We report the
complete chloroplast genomes of 36 Corydalis spp. and one Fumaria species. We …

[HTML][HTML] Chloroplast genomes of four Carex species: Long repetitive sequences trigger dramatic changes in chloroplast genome structure

S Xu, K Teng, H Zhang, K Gao, J Wu, L Duan… - Frontiers in Plant …, 2023 - frontiersin.org
The chloroplast genomes of angiosperms usually have a stable circular quadripartite
structure that exhibits high consistency in genome size and gene order. As one of the most …

[HTML][HTML] Evaluation of chloroplast genome annotation tools and application to analysis of the evolution of coffee species

C Guyeux, JC Charr, HTM Tran, A Furtado, RJ Henry… - PLoS …, 2019 - journals.plos.org
Chloroplast sequences are widely used for phylogenetic analysis due to their high degree of
conservation in plants. Whole chloroplast genomes can now be readily obtained for plant …

[HTML][HTML] The complete chloroplast genome sequence of Ampelopsis: gene organization, comparative analysis, and phylogenetic relationships to other angiosperms

G Raman, SJ Park - Frontiers in Plant Science, 2016 - frontiersin.org
Ampelopsis brevipedunculata is an economically important plant that belongs to the
Vitaceae family of angiosperms. The phylogenetic placement of Vitaceae is still unresolved …

[HTML][HTML] Initial Characterization of the Chloroplast Genome of Vicia sepium, an Important Wild Resource Plant, and Related Inferences About Its Evolution

C Li, Y Zhao, Z Xu, G Yang, J Peng, X Peng - Frontiers in genetics, 2020 - frontiersin.org
Lack of complete genomic information concerning Vicia sepium (Fabaceae: Fabeae)
precludes investigations of evolution and populational diversity of this perennial high-protein …

[HTML][HTML] Complete chloroplast genomes of four Physalis species (Solanaceae): lights into genome structure, comparative analysis, and phylogenetic relationships

S Feng, K Zheng, K Jiao, Y Cai, C Chen, Y Mao… - BMC Plant …, 2020 - Springer
Background Physalis L. is a genus of herbaceous plants of the family Solanaceae, which
has important medicinal, edible, and ornamental values. The morphological characteristics …