Transient XylR binding to the UAS of the Pseudomonas putida σ54 promoter Pu revealed with high intensity UV footprinting in vivo
M Valls, V de Lorenzo - Nucleic acids research, 2003 - academic.oup.com
… ) In vivo UV laser footprinting of the Pseudomonas putida sigma 54 Pu promoter reveals
that integration host factor couples transcriptional activity to growth phase. …
that integration host factor couples transcriptional activity to growth phase. …
Transcription factor levels enable metabolic diversification of single cells of environmental bacteria
R Guantes, I Benedetti, R Silva-Rocha… - The ISME …, 2016 - academic.oup.com
… This work shows how a relatively simple regulatory scenario (… of this catabolic promoter
after induction in exponential phase are … This supports the idea that P. putida heterogeneous …
after induction in exponential phase are … This supports the idea that P. putida heterogeneous …
Sigma 54 Levels and Physiological Control of the Pseudomonas putida Pu Promoter
P Jurado, LA Fernández, V de Lorenzo - Journal of bacteriology, 2003 - Am Soc Microbiol
… putida have been examined in a variety of growth stages and culture … The results from this
experiment revealed that neither the … caused by the integration host factor (3, 7, 31). Sigma …
experiment revealed that neither the … caused by the integration host factor (3, 7, 31). Sigma …
m-Xylene-Responsive Pu-PnifH Hybrid σ54 Promoters That Overcome Physiological Control in Pseudomonas putida KT2442
M Carmona, S Fernández, MJ Rodríguez… - Journal of …, 2005 - Am Soc Microbiol
… This is revealed by the fact that overproducing σ 54 largely … abolish growth phase-dependent
control of transcription, … while exhibiting somewhat lower transcriptional activity on the whole…
control of transcription, … while exhibiting somewhat lower transcriptional activity on the whole…
Fis negatively affects binding of Tn4652 transposase by out-competing IHF from the left end of Tn4652
R Teras, J Jakovleva, M Kivisaar - Microbiology, 2009 - microbiologyresearch.org
… -phase sigma factor RpoS and integration host factor (IHF). … I footprint assay we have identified
a binding site of P. putida … mobility shift and DNase I footprint studies revealed that Fis out-…
a binding site of P. putida … mobility shift and DNase I footprint studies revealed that Fis out-…
Genetic Evidence that Catabolites of the Entner-Doudoroff Pathway Signal C Source Repression of the σ54Pu Promoter of Pseudomonas putida
F Velázquez, I Di Bartolo, V De Lorenzo - Journal of bacteriology, 2004 - Am Soc Microbiol
… Integration of the plasmid into the chromosome was selected … simple assay system, as it
reveals the action of glucose while … 11) and the growth phase control of other σ 54 promoters (38)…
reveals the action of glucose while … 11) and the growth phase control of other σ 54 promoters (38)…
Levels and Activity of the Pseudomonas putida Global Regulatory Protein Crc Vary According to Growth Conditions
… Crc shows similarity to a family of nucleases that have highly conserved residues at their …
growth media. At mid-exponential phase (turbidity of 0.5 to 0.6), transcription from promoter …
growth media. At mid-exponential phase (turbidity of 0.5 to 0.6), transcription from promoter …
The Target for the Pseudomonas putida Crc Global Regulator in the Benzoate Degradation Pathway Is the BenR Transcriptional Regulator
… genes, a transcriptional fusion containing the PbenA promoter … exponential phase of growth
and increased when the growth … plot shows the values obtained as a function of cell growth (…
and increased when the growth … plot shows the values obtained as a function of cell growth (…
[PDF][PDF] IHF is a trans-acting factor implicated in the regulation of the proU P2 promoter
A Khodr, V Fairweather, E Bouffartigues… - FEMS Microbiol …, 2015 - researchgate.net
… In vivo UV laser footprinting of the Pseudomonas putidasigma 54Pu promoter reveals
that integration host factor couples transcriptional activity to growth phase. J Biol Chem 2002;277:…
that integration host factor couples transcriptional activity to growth phase. J Biol Chem 2002;277:…
TrwC-mediated site-specific recombination is controlled by host factors altering local DNA topology
CE César, M Llosa - Journal of bacteriology, 2007 - Am Soc Microbiol
… Footprinting assays revealed that there are two IHF binding … To test a possible effect of
transcription from this promoter on the … cycle (for instance, IHF levels are increased at stationary …
transcription from this promoter on the … cycle (for instance, IHF levels are increased at stationary …