Integration Host Factor IHF facilitates homologous recombination and mutagenic processes in Pseudomonas putida

K Mikkel, M Tagel, K Ukkivi, H Ilves, M Kivisaar - DNA repair, 2020 - Elsevier
Nucleoid-associated proteins (NAPs) such as IHF, HU, Fis, and H-NS alter the topology of
bound DNA and may thereby affect accessibility of DNA to repair and recombination …

Structure and function of the Pseudomonas putida integration host factor

R Calb, A Davidovitch, S Koby, H Giladi… - Journal of …, 1996 - Am Soc Microbiol
Integration host factor (IHF) is a DNA-binding and-bending protein that has been found in a
number of gram-negative bacteria. Here we describe the cloning, sequencing, and …

Fis negatively affects binding of Tn4652 transposase by out-competing IHF from the left end of Tn4652

R Teras, J Jakovleva, M Kivisaar - Microbiology, 2009 - microbiologyresearch.org
Transposition activity in bacteria is generally maintained at a low level. The activity of mobile
DNA elements can be controlled by bacterially encoded global regulators. Regulation of …

[HTML][HTML] IHF stabilizes pathogenicity island I of uropathogenic Escherichia coli strain 536 by attenuating integrase I promoter activity

M Chittò, M Berger, P Berger, L Klotz, P Dröge… - Scientific Reports, 2020 - nature.com
Pathogenicity islands (PAIs) represent horizontally acquired chromosomal regions and
encode their cognate integrase, which mediates chromosomal integration and excision of …

Impact of mutS Inactivation on Foreign DNA Acquisition by Natural Transformation in Pseudomonas stutzeri

P Meier, W Wackernagel - Journal of bacteriology, 2005 - Am Soc Microbiol
In prokaryotic mismatch repair the MutS protein and its homologs recognize the mismatches.
The mutS gene of naturally transformable Pseudomonas stutzeri ATCC 17587 (genomovar …

Transcription from Fusion Promoters Generated during Transposition of Transposon Tn4652 Is Positively Affected by Integration Host Factor in Pseudomonas putida

R Teras, R Hõrak, M Kivisaar - Journal of bacteriology, 2000 - Am Soc Microbiol
We have previously shown that both ends of the Tn 3 family transposon Tn 4652 contain
integration host factor (IHF) binding sites and that IHF positively regulates expression of the …

Genetic and biochemical analysis of IHF/HU hybrid proteins

D Goldenberg, H Giladi, AB Oppenheim - Biochimie, 1994 - Elsevier
Integration host factor (IHF) is a small heterodimeric DNA-binding protein of E coli composed
of two subunits, α and β, encoded by the himA and hip genes, respectively. IHF binds to …

Bacterial site‐specific DNA inversion systems

RC Johnson - Mobile DNA II, 2007 - Wiley Online Library
Specialized recombination reactions involving DNA inversions have evolved as a
mechanism to generate genetic diversity within a population. They often function to preadapt …

Determining the DNA sequence elements required for binding integration host factor to two different target sites

LM Hales, RI Gumport, JF Gardner - Journal of bacteriology, 1994 - Am Soc Microbiol
Binding sites for the Escherichia coli protein integration host factor (IHF) include a set of
conserved bases that can be summarized by the consensus sequence WATCAANNNNTTR …

Single-chain integration host factors as probes for high-precision nucleoprotein complex formation

Q Bao, N Christ, P Dröge - Gene, 2004 - Elsevier
Integration host factor (IHF) is a heterodimeric, site-specific DNA-binding and DNA-bending
protein from Escherichia coli. It is involved in high-precision DNA transactions where it …