Pseudogenization in pathogenic fungi with different host plants and lifestyles might reflect their evolutionary past

A van der Burgt, M Karimi Jashni… - Molecular plant …, 2014 - Wiley Online Library
Pseudogenes are genes with significant homology to functional genes, but contain
disruptive mutations (DMs) leading to the production of non‐or partially functional proteins …

Evolution, selection and isolation: a genomic view of speciation in fungal plant pathogens

EH Stukenbrock - New Phytologist, 2013 - Wiley Online Library
Speciation of fungal plant pathogens has been associated with host jumps, host
domestication, clonal divergence, and hybridization. Although we have substantial insight …

Obligate biotroph parasitism: can we link genomes to lifestyles?

E Kemen, JDG Jones - Trends in plant science, 2012 - cell.com
Although the oomycetes and fungi are evolutionarily very distantly related, both taxa evolved
biotrophy on plant hosts several times independently, giving rise to rust-and mildew-like …

[PDF][PDF] Convergent evolution: gene sharing by eukaryotic plant pathogens

JO Andersson - Current biology, 2006 - cell.com
Convergent Evolution: Gene Sharing by Eukaryotic Plant Pathogens Page 1 7. Fogassi, L.,
Ferrari, PF, Gesierich, B., Rozzi, S., Chersi, F., and Rizzolatti, G. (2005). Parietal lobe: From …

[HTML][HTML] Pseudogenes and their genome-wide prediction in plants

J Xiao, MK Sekhwal, P Li, R Ragupathy… - International Journal of …, 2016 - mdpi.com
Pseudogenes are paralogs generated from ancestral functional genes (parents) during
genome evolution, which contain critical defects in their sequences, such as lacking a …

P-GRe: An efficient pipeline to maximised pseudogene prediction in plants/eucaryotes

S Cabanac, C Mathe, C Dunand - bioRxiv, 2023 - biorxiv.org
Formerly considered as part of" junk DNA", pseudogenes are nowadays known for their role
in the post-transcriptional regulation of functional genes. In addition, their identification …

Genomics of biotrophy in fungi and oomycetes—emerging patterns

P Spanu, J Kämper - Current opinion in plant biology, 2010 - Elsevier
We are on the verge of a flood of new genome data from a plethora of plant pathogens.
Although the data are just beginning to be analysed systematically and to be published …

[HTML][HTML] Origin and fate of pseudogenes in Hemiascomycetes: a comparative analysis

I Lafontaine, B Dujon - BMC genomics, 2010 - Springer
Background Pseudogenes are ubiquitous genetic elements that derive from functional
genes after mutational inactivation. Characterization of pseudogenes is important to …

Pathogenicity genes of phytopathogenic fungi

A Idnurm, BJ Howlett - Molecular Plant Pathology, 2001 - Wiley Online Library
Recently many fungal genes have been identified that, when disrupted, result in strains with
a reduction or total loss of disease symptoms. Such pathogenicity genes are the subject of …

[HTML][HTML] Special Issue “Genomics of Fungal Plant Pathogens”

B Wang, YS Abubakar, Z Wang - Journal of Fungi, 2023 - mdpi.com
Plant diseases can be classified according to pathogenic organisms, and 70–80% of them
are fungal diseases. Fungal diseases cause a significant reduction in crop yield and quality …