Comparative transcriptomics provide insight into the morphogenesis and evolution of fistular leaves in Allium

S Zhu, S Tang, Z Tan, Y Yu, Q Dai, T Liu - BMC genomics, 2017 - Springer
Background Fistular leaves frequently appear in Allium species, and previous
developmental studies have proposed that the process of fistular leaf formation involves …

Leaf‐shape remodeling: programmed cell death in fistular leaves of Allium fistulosum

XL Ni, H Su, Y Zhou, FH Wang, WZ Liu - Physiologia plantarum, 2015 - Wiley Online Library
Some species of Allium in Liliaceae have fistular leaves. The fistular lamina of Allium
fistulosum undergoes a process from solid to hollow during development. The aims were to …

De novo transcriptomic analysis to identify differentially expressed genes during the process of aerenchyma formation in Typha angustifolia leaves

XM Du, XL Ni, XL Ren, GL Xin, GL Jia, HD Liu, WZ Liu - Gene, 2018 - Elsevier
Lysigenous aerenchyma is formed through programmed cell death (PCD) in Typha
angustifolia leaves. However, the genome and transcriptome data for this species are …

Tissue culture triggers chromosome alterations, amplification, and transposition of repeat sequences in Allium fistulosum

D Gernand, H Golczyk, T Rutten, T Ilnicki, A Houben… - …, 2007 - cdnsciencepub.com
Structural alterations in nuclei and chromosomes of cells derived from callus culture of
Allium fistulosum have been studied with fluorescent in situ hybridization (FISH) using 5S …

[HTML][HTML] A genome-wide transcriptome profiling reveals the early molecular events during callus initiation in Arabidopsis multiple organs

K Xu, J Liu, M Fan, W Xin, Y Hu, C Xu - Genomics, 2012 - Elsevier
Induction of a pluripotent cell mass termed callus is the first step in an in vitro plant
regeneration system, which is required for subsequent regeneration of new organs or whole …

Transcriptome sequencing to reveal the genetic regulation of leaf margin variation at early stage in birch

X Bian, C Qu, M Zhang, Y Li, R Han, J Jiang… - Tree genetics & …, 2019 - Springer
Lobe, a visual description of leaf morphology, is present in Betula pendula 'Dalecarlica'.
Although works involving leaf dehiscence have been conducted, knowledge on the genetic …

De novo assembly and characterization of the garlic (Allium sativum) bud transcriptome by Illumina sequencing

X Sun, S Zhou, F Meng, S Liu - Plant cell reports, 2012 - Springer
Garlic is widely used as a spice throughout the world for the culinary value of its flavor and
aroma, which are created by the chemical transformation of a series of organic sulfur …

Transcriptome and phytochemical analyses provide insights into the organic sulfur pathway in Allium hirtifolium

A Soorni, AM Akrami, R Abolghasemi, M Vahedi - Scientific Reports, 2021 - nature.com
Allium is one of the well-known genera of the Amaryllidaceae family, which contains over
780 species. Onions, garlic, leeks, and shallots are the most important species of this genus …

Chromosome-level genomes of three key Allium crops and their trait evolution

F Hao, X Liu, B Zhou, Z Tian, L Zhou, H Zong, J Qi… - Nature Genetics, 2023 - nature.com
Allium crop breeding remains severely hindered due to the lack of high-quality reference
genomes. Here we report high-quality chromosome-level genome assemblies for three key …

Incomplete lineage sorting and gene flow within Allium (Amayllidaceae)

ZZ Zhang, G Liu, M Li - Molecular Phylogenetics and Evolution, 2024 - Elsevier
The phylogeny and systematics of the genus Allium have been studied with a variety of
diverse data types, including an increasing amount of molecular data. However, strong …