Genome Sequence of the Euryhaline Javafish Medaka, Oryzias javanicus: A Small Aquarium Fish Model for Studies on Adaptation to Salinity

Y Takehana, M Zahm, C Cabau, C Klopp… - G3: Genes …, 2020 - academic.oup.com
The genus Oryzias consists of 35 medaka-fish species each exhibiting various ecological,
morphological and physiological peculiarities and adaptations. Beyond of being a …

Draft genome of the medaka fish: a comprehensive resource for medaka developmental genetics and vertebrate evolutionary biology

H Takeda - Development, growth & differentiation, 2008 - Wiley Online Library
The medaka Oryzias latipes is a small egg‐laying freshwater teleost, and has become an
excellent model system for developmental genetics and evolutionary biology. The medaka …

The medaka genome: why we need multiple fish models in vertebrate functional genomics

H Mitani, Y Kamei, S Fukamachi, S Oda, T Sasaki… - Vertebrate …, 2006 - karger.com
Medaka (Oryzias latipes) is widely used in research in the fields of biology, medicine,
environmental science and fisheries. Zebrafish and medaka are well established as genetic …

The genome of the marine medaka Oryzias melastigma

HS Kim, BY Lee, J Han, CB Jeong… - Molecular ecology …, 2018 - Wiley Online Library
Marine medaka (Oryzias melastigma) is considered to be a useful fish model for marine and
estuarine ecotoxicology studies and has good potential for field‐based population genomics …

Medaka genome project

D Kobayashi, H Takeda - Briefings in Functional Genomics and …, 2008 - academic.oup.com
The medaka Oryzias latipes is a small egg-laying freshwater teleost, and has become an
excellent model system for ecotoxicology, developmental genetics, genomics and …

[HTML][HTML] The medaka draft genome and insights into vertebrate genome evolution

M Kasahara, K Naruse, S Sasaki, Y Nakatani, W Qu… - Nature, 2007 - nature.com
Teleosts comprise more than half of all vertebrate species and have adapted to a variety of
marine and freshwater habitats. Their genome evolution and diversification are important …

[HTML][HTML] Genomic variations and epigenomic landscape of the Medaka Inbred Kiyosu-Karlsruhe (MIKK) panel

A Leger, I Brettell, J Monahan, C Barton, N Wolf… - Genome Biology, 2022 - Springer
Abstract Background The teleost medaka (Oryzias latipes) is a well-established vertebrate
model system, with a long history of genetic research, and multiple high-quality reference …

[HTML][HTML] Tissue-specific transcriptome assemblies of the marine medaka Oryzias melastigma and comparative analysis with the freshwater medaka Oryzias latipes

KP Lai, JW Li, SY Wang, JMY Chiu, A Tse, K Lau, S Lok… - BMC genomics, 2015 - Springer
Abstract Background The marine medaka Oryzias melastigma has been demonstrated as a
novel model for marine ecotoxicological studies. However, the lack of genome and …

[HTML][HTML] Long-read sequencing and de novo genome assembly of marine medaka (Oryzias melastigma)

P Liang, HSA Saqib, X Ni, Y Shen - BMC genomics, 2020 - Springer
Abstract Background Marine medaka (Oryzias melastigma) is considered as an important
ecotoxicological indicator to study the biochemical, physiological and molecular responses …

The Genome of the Self-Fertilizing Mangrove Rivulus Fish, Kryptolebias marmoratus : A Model for Studying Phenotypic Plasticity and Adaptations to …

JL Kelley, MC Yee, AP Brown… - Genome biology and …, 2016 - academic.oup.com
The mangrove rivulus (Kryptolebias marmoratus) is one of two preferentially self-fertilizing
hermaphroditic vertebrates. This mode of reproduction makes mangrove rivulus an …