Dual domestication, diversity, and differential introgression in Old World cotton diploids

CE Grover, MA Arick, A Thrash… - Genome Biology and …, 2022 - academic.oup.com
Domestication in the cotton genus is remarkable in that it has occurred independently four
different times at two different ploidy levels. Relatively little is known about genome evolution …

A Calmodulin-Like Gene (GbCML7) for Fiber Strength and Yield Improvement Identified by Resequencing Core Accessions of a Pedigree in Gossypium barbadense

N Zhao, W Wang, K Jiang, CE Grover… - Frontiers in Plant …, 2022 - frontiersin.org
Sea Island cotton (Gossypium barbadense) is world-renowned for its superior natural fiber.
Although fiber strength is one of the most important fiber quality traits, genes contributing to …

Mapping intron retention events contributing to complex traits using splice quantitative trait locus

S Wang, H Wu, Y Zhao, L Wang, X Guan, T Zhao - Plant Methods, 2023 - Springer
Background Alternative splicing (AS) of mRNA plays an important roles in transcriptome
diversity, involving regulation of plant growth and stress response. Understanding the …

[HTML][HTML] Genome and haplotype provide insights into the population differentiation and breeding improvement of Gossypium barbadense

N Wang, Y Li, Q Meng, M Chen, M Wu, R Zhang… - Journal of Advanced …, 2023 - Elsevier
Abstract Introduction Sea-island cotton (Gossypium barbadense, Gb) is one of the major
sources of high-grade natural fiber. Besides the common annual Gb cotton, perennial Gb …

Genetic diversity and evolution of the plastome in allotetraploid cotton (Gossypium spp.)

XL Yan, SL Kan, MX Wang, YY Li… - … of Systematics and …, 2024 - Wiley Online Library
Cotton (Gossypium spp.) is a vital global source of renewable fiber and ranks among the
world's most important cash crops. While extensive nuclear genomic data of Gossypium has …

Histone Maps in Gossypium darwinii Reveal Epigenetic Regulation Drives Subgenome Divergence and Cotton Domestication

J Han, G Yu, X Zhang, Y Dai, H Zhang, B Zhang… - International Journal of …, 2023 - mdpi.com
The functional annotation of genomes, including chromatin modifications, is essential to
understand the intricate architecture of chromatin and the consequential gene regulation …

Aphid and caterpillar feeding drive similar patterns of induced defences and resistance to subsequent herbivory in wild cotton

T Quijano-Medina, J Interian-Aguiñaga… - Planta, 2023 - Springer
Main conclusion Our results indicate caterpillars and aphids cause similar levels of induced
defences and resistance against caterpillars in wild cotton plants. These symmetrical effects …

Discovery and Analyses of Caulimovirid-like Sequences in Upland Cotton (Gossypium hirsutum)

N Aboughanem-Sabanadzovic, TW Allen… - Viruses, 2023 - mdpi.com
Analyses of Illumina-based high-throughput sequencing data generated during
characterization of the cotton leafroll dwarf virus population in Mississippi (2020–2022) …

Little Evidence for Homoeologous Gene Conversion and Homoeologous Exchange Events in Gossypium Allopolyploids

JL Conover, CE Grover, J Sharbrough, D Sloan… - bioRxiv, 2023 - biorxiv.org
A complicating factor in analyzing allopolyploid genomes is the possibility of physical
interactions between homoeologous chromosomes during meiosis, resulting in either …

Soil salinization effects on volatile signals that mediate the induction of chemical defenses in wild cotton

T Quijano-Medina, Y Briones-May… - Arthropod-Plant …, 2024 - Springer
Plants respond to complex blends of above-and below-ground volatile organic compounds
(VOCs) emitted by neighboring plants. These responses often involve priming (ie …