[HTML][HTML] PPanG: a precision pangenome browser enabling nucleotide-level analysis of genomic variations in individual genomes and their graph-based pangenome
M Liu, F Zhang, H Lu, H Xue, X Dong, Z Li, J Xu… - BMC genomics, 2024 - Springer
Graph-based pangenome is gaining more popularity than linear pangenome because it
stores more comprehensive information of variations. However, traditional linear genome …
stores more comprehensive information of variations. However, traditional linear genome …
Integrating advancements in root phenotyping and genome‐wide association studies to open the root genetics gateway
Plant adaptation to challenging environmental conditions around the world has made root
growth and development an important research area for plant breeders and scientists …
growth and development an important research area for plant breeders and scientists …
A haplotype‐resolved genome for Rhododendron × pulchrum and the expression analysis of heat shock genes
Rhododendron is the largest genus in Ericaceae and is well known for its diversity and
beauty of flowers present in different species, making it a much‐revered lineage of …
beauty of flowers present in different species, making it a much‐revered lineage of …
Structural variations in crocodile lizard populations provide novel insights into genomic variations in endangered animals
L Xiong, Z Zhou, Y Song, S Huang, Z Li… - Molecular …, 2023 - Wiley Online Library
Population‐scale genome resequencing of endangered animals may contribute to gaining
an understanding of how genomes vary as population sizes become smaller, as well as the …
an understanding of how genomes vary as population sizes become smaller, as well as the …
Pangenomic exploration of Theobroma cacao: New Insights into Gene Content Diversity and Selection During Domestication
Abstract The Cacao tree (Theobroma cacao L.) is a major cash crop and an important
source of income for millions of farmers across Africa, Asia and Latin America. However …
source of income for millions of farmers across Africa, Asia and Latin America. However …
[HTML][HTML] Fingerprint Finder: Identifying Genomic Fingerprint Sites in Cotton Cohorts for Genetic Analysis and Breeding Advancement
S Liu, H Cheng, Y Zhang, M He, D Zuo, Q Wang, L Lv… - Genes, 2024 - mdpi.com
Genomic data in Gossypium provide numerous data resources for the cotton genomics
community. However, to fill the gap between genomic analysis and breeding field work …
community. However, to fill the gap between genomic analysis and breeding field work …
[HTML][HTML] Characterization of Expression and Epigenetic Features of Core Genes in Common Wheat
D Zheng, W Zhang - Genes, 2022 - mdpi.com
The availability of multiple wheat genome sequences enables us to identify core genes and
characterize their genetic and epigenetic features, thereby advancing our understanding of …
characterize their genetic and epigenetic features, thereby advancing our understanding of …
[HTML][HTML] Graph pangenomes track genetic variants for crop improvement
A Hameed, P Poznanski, A Nadolska-Orczyk… - International Journal of …, 2022 - mdpi.com
Global climate change and the urgency to transform crops require an exhaustive genetic
evaluation. The large polyploid genomes of food crops, such as cereals, make it difficult to …
evaluation. The large polyploid genomes of food crops, such as cereals, make it difficult to …
Examining population structure across multiple collections of Cannabis
Population structure of Cannabis sativa L. was explored across nine independent
collections that each contained a unique sampling of varieties. Hierarchical Clustering of …
collections that each contained a unique sampling of varieties. Hierarchical Clustering of …
大豆泛基因组研究进展
刘羽诚, 申妍婷, 田志喜 - 遗传, 2024 - chinagene.cn
人工驯化为农业发展提供了原始驱动力, 也深刻地改变了许多动植物的遗传背景.
伴随组学大数据理论和技术体系的发展, 作物基因组研究已迈入泛基因组时代 …
伴随组学大数据理论和技术体系的发展, 作物基因组研究已迈入泛基因组时代 …