Correlated mutations: a hallmark of phenotypic amino acid substitutions

A Kowarsch, A Fuchs, D Frishman… - PLoS computational …, 2010 - journals.plos.org
Point mutations resulting in the substitution of a single amino acid can cause severe
functional consequences, but can also be completely harmless. Understanding what …

ELANE mutant–specific activation of different UPR pathways in congenital neutropenia

R Nustede, M Klimiankou, O Klimenkova… - British Journal of …, 2016 - Wiley Online Library
A number of studies have demonstrated induction of the unfolded protein response (UPR) in
patients with severe congenital neutropenia (CN) harbouring mutations of ELANE, encoding …

PhyleasProg: a user-oriented web server for wide evolutionary analyses

J Busset, C Cabau, C Meslin, G Pascal - Nucleic acids research, 2011 - academic.oup.com
Evolutionary analyses of biological data are becoming a prerequisite in many fields of
biology. At a time of high-throughput data analysis, phylogenetics is often a necessary …

Enzyme function and its evolution

JBO Mitchell - Current Opinion in Structural Biology, 2017 - Elsevier
Highlights•Experimental and computational approaches illuminate how enzyme function
evolves.•Structure, EC number, and mechanism are complementary descriptions of …

Measuring the functional sequence complexity of proteins

KK Durston, DKY Chiu, DL Abel, JT Trevors - Theoretical Biology and …, 2007 - Springer
Abstract Background Abel and Trevors have delineated three aspects of sequence
complexity, Random Sequence Complexity (RSC), Ordered Sequence Complexity (OSC) …

[HTML][HTML] Novel ELANE gene mutation in a Korean girl with severe congenital neutropenia

YJ Shim, HJ Kim, JS Suh, KS Lee - Journal of Korean Medical …, 2011 - ncbi.nlm.nih.gov
Severe congenital neutropenia is a heterozygous group of bone marrow failure syndromes
that cause lifelong infections. Mutation of the ELANE gene encoding human neutrophil …

Sequence‐based prediction of pathological mutations

C Ferrer‐Costa, M Orozco… - … : Structure, Function, and …, 2004 - Wiley Online Library
The development of methods to assess the impact of amino acid mutations on human health
has become an important goal in biomedical research, due to the growing number of …

PML-controlled responses in severe congenital neutropenia with ELANE-misfolding mutations

PA Olofsen, DA Bosch, O Roovers… - Blood …, 2021 - ashpublications.org
Mutations in ELANE cause severe congenital neutropenia (SCN), but how they affect
neutrophil production and contribute to leukemia predisposition is unknown. Neutropenia is …

[HTML][HTML] New avenues in protein function prediction

I Friedberg, M Jambon, A Godzik - Protein science: a publication of …, 2006 - ncbi.nlm.nih.gov
The huge influx of protein sequence and structure information is becoming more a quagmire
of data rather than the font of knowledge that was anticipated. The latest tally of sequences …

An update of DIVERGE software for functional divergence analysis of protein family

X Gu, Y Zou, Z Su, W Huang, Z Zhou… - Molecular biology …, 2013 - academic.oup.com
DIVERGE is a software system for phylogeny-based analyses of protein family evolution and
functional divergence. It provides a suite of statistical tools for selection and prioritization of …